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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908859.1_cds_XP_016459097.1_52659
CDS Infomation

[gene=LOC107782686] [db_xref=GeneID:107782686] [protein=glucan endo-1,3-beta-glucosidase 5-like] [protein_id=XP_016459097.1] [location=complement(join(233606..234725,235725..236068))] [gbkey=CDS]
Sequence

ATGGGAATTATTGGTATGAAAGATGGTATTTGGATTTCGATGATTTTGGGGTTTATGGTA
TTAGGAAAAGTGTATGGAATTGGAGCAAACTGGGGAACACAAGCAACACATCCTTTGCCA
CCAAACATAGTAGTGAAGCTGCTCAAGGACAATGGAATTCAGAAAGTGAAGCTGTTTGAT
GCAGATTCAGATATCTTTAAAGCACTCAGTGGCTCTGGAATTGAAGTCATGGTTGGAATC
CCAAATGAAATGCTTTATAGTTTAGCTAACAGTTTGGGTGCTGCTGAGAAATGGGTTGAG
AAGAATATCTCTTCATTTGTCTCTTCCAACAGTGTTGATATCAAATATGTTGCAGTTGGA
AATGAACCATTTCTATCTCAGTTTAATGGAACATTTCTGCCAACAACATTCCCAGCTCTT
CAAAACATCCAGGCAGCCCTCATAAAAGCCGGTCTTGGCAATCGGGTGAAAGTCACTATT
CCTCTCAATGCCGATGTATACGAGAGTTCAAGTGAAAAACCTTCAACAGGTGACTTCAGG
CAAGACATTCGTGATCTCATGGTGAACATTGTCAAGTTCTTGAATGACAATGGTGGTGCA
TTTACTGTCAATATCTATCCTTTTATAAGTCTCTACAATGACCCCAACTTTCCTGCTGAT
TATGCTTTCTTCGACGGATATTCAAACGCCATCGATGACAATGGGAAAATTTACAACAAC
GTGTTCGATGCAAACCATGATACCCTGCTTTGGGCGTTGCAGAAAAATGGATACCCAAAT
ATGTCAATCATAATAGGGGAAGTCGGATGGCCAACAGATGGAGACAATAATGCAAACTTA
AAGGCTGCCCAGAGATTCAACCAAGGATTCATGACTCACATTTCGGGTGGAAAGGGGACA
CCAATGAGACCTGGCCCTATAGATGCTTATCTGTTCAGCCTGATCGACGAGGACGCGAAA
AGCATCCAGCCTGGTAGCTTTGAACGCCATTGGGGAATATTTTACTTCGATGGTACGCCT
AAATACAATCTTTCCCTGGGTGCAAACAGTGGAGGTTTAGTACCAGCAAGCGGTGTTCAT
TACCTGGCTCGCCAGTGGTGCGTGCTGTCGCCCTCGGCCAGTCTTGATGATCCACAGCTA
GCTGATAGTGTGGGCTATGCATGTTCACATGCTGATTGCACCAGCCTCGGACATGGAACA
TCATGCGCGGATCTGGATACTCGTGGTAACATTTCATATGCATTCAACAGTTACTATCAG
GAAAACGACCAGCTACCTACTGCCTGCAAGTTTCCGAACCTTTCCATGGTCACAAACACA
GATCCATCACCACCGGGTGGAACCTGTAAATTCAAAATAATGATCCAAGCGAGTAGTCCT
AAAAGCCTTAAGAGTAATGCATTTACTTCTAAGCCTGTCAATGTGATGCTTCTGGTTATA
GTTTCTTTGTTGAGTGTTTTGTAG

Peptide Sequence

PEP ID

XP_016459097.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase 5-like [Nicotiana tabacum]
Sequence

MGIIGMKDGIWISMILGFMVLGKVYGIGANWGTQATHPLPPNIVVKLLKDNGIQKVKLFD
ADSDIFKALSGSGIEVMVGIPNEMLYSLANSLGAAEKWVEKNISSFVSSNSVDIKYVAVG
NEPFLSQFNGTFLPTTFPALQNIQAALIKAGLGNRVKVTIPLNADVYESSSEKPSTGDFR
QDIRDLMVNIVKFLNDNGGAFTVNIYPFISLYNDPNFPADYAFFDGYSNAIDDNGKIYNN
VFDANHDTLLWALQKNGYPNMSIIIGEVGWPTDGDNNANLKAAQRFNQGFMTHISGGKGT
PMRPGPIDAYLFSLIDEDAKSIQPGSFERHWGIFYFDGTPKYNLSLGANSGGLVPASGVH
YLARQWCVLSPSASLDDPQLADSVGYACSHADCTSLGHGTSCADLDTRGNISYAFNSYYQ
ENDQLPTACKFPNLSMVTNTDPSPPGGTCKFKIMIQASSPKSLKSNAFTSKPVNVMLLVI
VSLLSVL

Transcript Sequence

Gene sequence data has not been registered.